Hello again, hopefully we have more luck with Farbar this time:

Restore point was successfully created.
HKLM\System\CurrentControlSet\Services\ptun0901 => removed successfully
ptun0901 => service removed successfully
C:\Windows\System32\DRIVERS\ptun0901.sys => moved successfully

=========== EmptyTemp: ==========

BITS transfer queue => 8388608 B
DOMStore, IE Recovery, AppCache, Feeds Cache, Thumbcache, IconCache => 85748748 B
Java, Flash, Steam htmlcache => 157804769 B
Windows/system/drivers => 347912 B
Edge => 0 B
Chrome => 539618451 B
Firefox => 0 B
Opera => 0 B

Temp, IE cache, history, cookies, recent:
Users => 0 B
Default => 0 B
Public => 0 B
ProgramData => 0 B
systemprofile => 58558278 B
systemprofile32 => 68964 B
LocalService => 0 B
NetworkService => 293322 B
Mark => 765486909 B
Work => 23373 B

RecycleBin => 1207929 B
EmptyTemp: => 1.5 GB temporary data Removed.

================================


The system needed a reboot.

==== End of Fixlog 22:10:02 ====

I couldn't find any apply action option on Malwarebytes but there was a "quarantine selected" option, not sure if that helps:

Malwarebytes
www.malwarebytes.com

-Log Details-
Scan Date: 1/17/19
Scan Time: 10:14 PM
Log File: 3d11d888-1aa5-11e9-b00a-74d435d74a2b.json

-Software Information-
Version: 3.6.1.2711
Components Version: 1.0.519
Update Package Version: 1.0.8840
License: Trial

-System Information-
OS: Windows 7 Service Pack 1
CPU: x64
File System: NTFS
User: Mark-PC\Mark

-Scan Summary-
Scan Type: Threat Scan
Scan Initiated By: Manual
Result: Completed
Objects Scanned: 341533
Threats Detected: 1
Threats Quarantined: 1
Time Elapsed: 3 min, 31 sec

-Scan Options-
Memory: Enabled
Startup: Enabled
Filesystem: Enabled
Archives: Enabled
Rootkits: Disabled
Heuristics: Enabled
PUP: Detect
PUM: Detect

-Scan Details-
Process: 0
(No malicious items detected)

Module: 0
(No malicious items detected)

Registry Key: 0
(No malicious items detected)

Registry Value: 0
(No malicious items detected)

Registry Data: 0
(No malicious items detected)

Data Stream: 0
(No malicious items detected)

Folder: 0
(No malicious items detected)

File: 1
Generic.Malware/Suspicious, C:\USERS\MARK\DOWNLOADS\KMSAUTO+NET.ZIP, Quarantined, [0], [392686],1.0.8840

Physical Sector: 0
(No malicious items detected)

WMI: 0
(No malicious items detected)


(end)

I couldn't find a "Quarantine Log" section but under logs there was an "export" option, this is what I got from it:

Emsisoft Emergency Kit 2018.6.0.8742 stable [en-us]
OS: Windows 7 Service Pack 1 (Version 6.1, Build 7601, 64-bit Edition)

Forensics log

Date Component Action Details
17/01/2019 22:29:08 Scanner Scan finished Scanned 77035 objects and found nothing.
17/01/2019 22:27:50 User MARK-PC\Mark Scan started Malware Scan
17/01/2019 22:27:50 User MARK-PC\Mark Setting modified "Detect PUPs" has been changed to "Enabled".
17/01/2019 22:27:02 User Update Downloaded and installed 64 files (34458 kb) (15 sec.) Application restart notification.
17/01/2019 22:26:45 User Update Failed with error "Server returned error" (0 sec.).

Computer is actually running a little smoother now.